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Scalesurfer v6

This repository contains the ScaleSurfer 3D TransUNet volume segmentation checkpoint fine-tuned for FreeSurfer v6 labels.

Sourcehuggingface.co/rphammonds/scalesurfer-v6/tree/94a4efe9dc46ca5b0daf3eaeb6189dcbde23237f
KindOtherVersionRevision 94a4efeCgrade

Model source

Kind
Other
File size
10.0 MB
Version
vRevision 94a4efe
Updated
Nov 1, 2026
Downloads
2
Source
Hugging Face

Source description

ScaleSurfer FreeSurfer v6 Volume Model

This repository contains the ScaleSurfer 3D TransUNet volume segmentation checkpoint fine-tuned for FreeSurfer v6 labels.

Files

  • transunet3d.safetensors: model weights in safetensors format.
  • config.json: architecture and checkpoint configuration.
  • metadata.json: conversion checksums and sanitized training/evaluation metadata.

Metrics

Split countsBest validation CEFinal test CE
train=1592, val=202, test=2020.0219637816864075050.020560515551173157

Loading

ScaleSurfer resolves this model automatically when ScaleSurfer(..., fs_version=6) is used.

This model is intended for research workflows and is not a clinical diagnostic device.

Sources

1 source
Hugging FacePrimaryVersion 94a4efe9dc46ca5b0daf3eaeb6189dcbde23237f
huggingface.co/rphammonds/scalesurfer-v6/tree/94a4efe9dc46ca5b0daf3eaeb6189dcbde23237f

Verified Nov 1

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Model artifacts

1 artifact

transunet3d.safetensors

safetensors · FP32 (unverified) · 10.0 MB · SHA-256 e3fee0400256…fb8a · Hugging Face

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Source excerpts

2 excerpts
ReadmeAug 18huggingface.co/rphammonds/scalesurfer-v6

--- library_name: pytorch pipeline_tag: image-segmentation tags: - medical-imaging - freesurfer - segmentation - safetensors - scalesurfer --- # ScaleSurfer FreeSurfer v6 Volume Model This repository contains the ScaleSurfer 3D TransUNet volume segmentation checkpoint fine-tuned for FreeSurfer v6 labels. ## Files - `transunet3d.safetensors`: model weights in safetensors format. - `config.json`: architecture and checkpoint configuration. - `metadata.json`: conversion checksums and sanitized training/evaluation metadata. ## Metrics | Split counts | Best validation CE | Final test CE | | --- | ---: | ---: | | train=1592, val=202, test=202 | 0.021963781686407505 | 0.020560515551173157 | ## Loading ScaleSurfer resolves this model automatically when `ScaleSurfer(..., fs_version=6)` is used. This model is intended for research workflows and is not a clinical diagnostic device.

NoteAug 18huggingface.co/rphammonds/scalesurfer-v6

Source context: 2 downloads · 0 likes · Pipeline image-segmentation · Library pytorch · Repo rphammonds/scalesurfer-v6