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Light-UNETR is a lightweight transformer architecture designed for efficient 3D medical image segmentation, introduced in the paper Harnessing Lightweight Transformer with Contextual Synergic Enhancement for...

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Other
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5.46 MB
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vRevision e6a22a8
Updated
Sep 15, 2026
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0
Tasks
Image segmentation
Source
Hugging Face

Source description

Light-UNETR

Light-UNETR is a lightweight transformer architecture designed for efficient 3D medical image segmentation, introduced in the paper Harnessing Lightweight Transformer with Contextual Synergic Enhancement for Efficient 3D Medical Image Segmentation.

The model addresses computational efficiency through a Lightweight Dimension Reductive Attention (LIDR) module and a Compact Gated Linear Unit (CGLU). To improve data efficiency, the authors propose a Contextual Synergic Enhancement (CSE) learning strategy.

Resources

Performance

Light-UNETR significantly reduces computational costs compared to standard architectures. For instance, on the Left Atrial (LA) Segmentation dataset, it reduces FLOPs by 90.8% and parameters by 85.8% compared to state-of-the-art methods while achieving superior performance even with limited (10%) labeled data.

Sample Usage

To test a pre-trained Light-UNETR model using the official implementation, you can use the following command structure:

# Example: Test BraTS model
python test_cse.py --dataset brats --model lightunetr --checkpoint lightunetr_best_model_brats_25lab.pth --gpu 0

Citation

If you find this work useful, please cite:

@article{liu2025harnessing,
  title={Harnessing Lightweight Transformer with Contextual Synergic Enhancement for Efficient 3D Medical Image Segmentation},
  author={Liu, Xinyu and Chen, Zhen and Li, Wuyang and Li, Chenxin and Yuan, Yixuan},
  year={2025}
}

Acknowledgement

The authors appreciate the contributions of SSL4MIS, Slim UNETR, BCP, and other referenced codebases.

Sources

1 source
Hugging FacePrimaryVersion e6a22a872699dcf78a26c7e55c1d7694a13f90de
huggingface.co/jeffrey423/lightunetr-models/tree/e6a22a872699dcf78a26c7e55c1d7694a13f90de

Verified Sep 15

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Model artifacts

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lightunetr_best_model_brats_25lab.pth

pth · 5.46 MB · SHA-256 1ed4bd8cdebd…05aa · Hugging Face

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lightunetr_best_model_la_4lab.pth

pth · 5.46 MB · SHA-256 36f49050aa46…d75b · Hugging Face

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lightunetr_best_model_la_8lab.pth

pth · 5.46 MB · SHA-256 a2a3a355ddcf…68a7 · Hugging Face

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lightunetr_best_model_pancreas_12lab.pth

pth · 5.46 MB · SHA-256 dcd5b6771b83…1600 · Hugging Face

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lightunetr_best_model_pancreas_6lab.pth

pth · 5.46 MB · SHA-256 b770836579b0…5a4a · Hugging Face

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Source excerpts

2 excerpts

--- license: mit pipeline_tag: image-segmentation tags: - medical - 3d - transformer --- # Light-UNETR Light-UNETR is a lightweight transformer architecture designed for efficient 3D medical image segmentation, introduced in the paper [Harnessing Lightweight Transformer with Contextual Synergic Enhancement for Efficient 3D Medical Image Segmentation](https://huggingface.co/papers/2603.23390). The model addresses computational efficiency through a Lightweight Dimension Reductive Attention (LIDR) module and a Compact Gated Linear Unit (CGLU). To improve data efficiency, the authors propose a Contextual Synergic Enhancement (CSE) learning strategy. ## Resources - **Paper:** [Harnessing Lightweight Transformer with Contextual Synergic Enhancement for Efficient 3D Medical Image Segmentation](https://huggingface.co/papers/2603.23390) - **Code:** [Official GitHub Repository](https://github.com/CUHK-AIM-Group/Light-UNETR) ## Performance Light-UNETR significantly reduces computational costs compared to standard architectures. For instance, on the Left Atrial (LA) Segmentation dataset, it reduces FLOPs by 90.8% and parameters by 85.8% compared to state-of-the-art methods while achieving superior performance even with limited (10%) labeled data. ## Sample Usage To test a pre-trained Light-UNETR model using the official implementation, you can use the following command structure: ```bash # Example: Test BraTS model python test_cse.py --dataset brats --model lightunetr --checkpoint lightunetr_best_model_brats_25lab.pth --gpu 0 ``` ## Citation If you find this work useful, please cite: ```bibtex @article{liu2025harnessing, title={Harnessing Lightweight Transformer with Contextual Synergic Enhancement for Efficient 3D Medical Image Segmentation}, author={Liu, Xinyu and Chen, Zhen and Li, Wuyang and Li, Chenxin and Yuan, Yixuan}, year={2025} } ``` ## Acknowledgement The authors appreciate the contributions of [SSL4MIS](https://github.com/HiLab-git/SSL4MIS), [Slim UNETR](https://github.com/aigzhusmart/Slim-UNETR), [BCP](https://github.com/DeepMed-Lab-ECNU/BCP), and other referenced codebases.

Source context: 0 downloads · 0 likes · Pipeline image-segmentation · Repo jeffrey423/lightunetr-models